CDS

Accession Number TCMCG006C40539
gbkey CDS
Protein Id XP_013743957.1
Location complement(join(15201063..15201149,15201239..15201307,15201396..15201462,15201568..15201635,15201718..15201828,15201925..15201982,15202084..15202120,15202217..15202310,15202451..15202516,15202598..15202662,15202758..15202902,15202996..15203061,15203178..15203327,15203432..15203501,15203578..15203723,15203829..15203912,15204057..15204100,15204183..15204326,15204405..15204603,15204698..15204826,15204910..15204993,15205080..15205193,15205322..15205429,15205510..15205605,15205729..15205797,15205889..15205990,15206082..15206177,15206321..15206404,15206496..15206613,15206685..15206758,15206864..15207037,15207132..15207379,15207727..15207877,15207956..15208072,15208855..15208962,15209036..15209161,15209273..15209305))
Gene LOC106446729
GeneID 106446729
Organism Brassica napus

Protein

Length 1266aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013888503.2
Definition Niemann-Pick C1 protein-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1 protein-like
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGATTCCTTCGTATCTTCTTCTTCTCCTGATTCTGTTTGTTCTTTGTAGAGTGGAAGGAAGACAGTCAGCAGGATACTGTGCAATGTATGATATCTGTGGAGCACGGAGCGATGGGAAAGTACTGAATTGCCCCTTTAACATCCCTGCCGTCAAGCCGGATGATTTATTATCTTCAAAGATACAAAGCTTGTGCCCAACCATCGCTGGCGACGTTTGTTGCACTGAAACTCAGTTCGACACGTTACGTTCCCAAGTTCAACAGGCTATTCCCTTTATTGTAGGCTGTCCAGCATGCTTGAGGAACTTTCTGAATCTTTTCTGTGAACTTACTTGCTCTCCTGATCAAAGTCTATTTATCAACGTTACTTCTACTACAAAGATCAAGAATAATTCGACCGTTGATGGGATTGAGTACTACATAACCGATTCTTTTGGAGAAGGGTTGTATGAGTCTTGCAAGAATGTGAAGTTCGGTAGCTCCAACAGCCGAGCTTTAGATTTTCTCGGAGCTGGTGCAAAGAATTTTAAAGAGTGGTTTGCATTTATCGGCCAGAAAGCTGGTGTCAATTTGCCAGGCTCACCTTATGGGATCAAGTTTTCACCGTCACCACCAGTGTCATCTTTAATGAAGCCTATGAATGTGTCTACTTATTCATGCAGTGACGATACTCTTGGATGTTCTTGTGGTGATTGTCCTTCTGCAGCTGCTTGCTCCAGTACAGCAGCACCTCCTACTCAGAAAAGGCATGCTTGCTCAATCAAGATTGGATCACTTGAGGCCAAGTGTGTTGATTTTGTGCTAGCCATTCTGTATACTGTCTTGGTTTCATTGTTTCTTGGAGGTGGATTATTTCACAGAATAAAGGGTAAGAAAAATAGCTCACCATTGTCCGAAGCTAGCAGAGATAGAAGTTCTGTTAATCCGCAAAAAGCAGACACTATTCATGCGCAGATGCTACAAAACACTCCACAGAGAAACTGGGCTCAGCTGTCAGCAGTACAAGGATTCTTGGCCAATTTTTACAGGAAGTATGGGATCTGGGTAGCAAGAAACCCAACTCTAGTTTTGTGTTTGTCAGTCTCTGCAGTTCTTCTACTTTGTGTGGGTCTGGTCCAGTTCAAAGTTGAGACAAAGCCTGATAAGCTATGGGTAGGTAAAGGGAGTAGAGCTGCTGAAGAAAAACAATTCTTTGACACTCATCTTGCTCCTTTCTACAGAATTGAACAGTTAATTATAGCATCAGTTCCTAAATCTCCTCACGATAAGGCGCCAGAAATTTTGACAGATGACAATATTAAGTTACTTTTTGACATACAAAAGAAGGTTGATGGACTGAGAGCAAACCACTCAGGTTCAATGGTTTCTCTAACAGACATTTGCTTGAAACCACTTGGAGAGGATTGTGCCACACAGAGTGTTCTGCAGTATTTCAAGATGAAACCAGGAAATTATGATGACTTTGGAGGCGTCGATCATGTTAAATATTGCTTTGAGCATTTCACCTCGACAGAGTCATGTTTGAGTGCATTTAAGGGTCCCCTTGATCCAACAACAGCACTGGGAGGTTTCTCAGGGAACAGTTATAGTGAGGCTTCTGCTTTTATTGTGACTTATCCTGTGGACAATGCTGTTGACAACGAAGGTAACAAAACTGAGAAAGCAGTGGCTTGGGAGAAAGCCTTTATCCAACTTGCCAAGGATGAATTGTTGCCAATGGTTAAATCAAAAGGTTTAACTCTTTCTTTCTCTTCGGAAAGCTCTATTGAAGAAGAGTTGAAAAGAGAAAGCACAGCAGATGTTATAACTATAGCCATAAGTTATCTTGTCATGTTTGCATATATATCACTGGCACTTGGGGATGCACCTCGCTTGAATTCCTTTTACATTACATCCAAGGTTCTGCTTGGTCTATCTGGTGTTCTTCTCGTCATGCTTTCTGTCCTCGGCTCCGCAGGATTGTTCAGTGCCGTTGGGATGAAATCCACTCTGATCATAATGGAAGTTATACCTTTTCTTGTTTTGGCTGTCGGTGTTGATAATATGTGCATACTGGTTCATGCTGTCAAGAGGCAAGAGCAGGATCTACTTCTGGAAAGAAGAATAAGCAATGCTCTTATGGAAGTTGGACCATCGATCACACTTGCAAGTCTAGCAGAGATTTTAGCTTTTGCTGTTGGTGCTTACATCAAAATGCCAGCTGTTCGAGTGTTCTCCATGTTTGCTGCATTGGCCGTCCTTTTGGACTTCATTCTCCAGGTTACTGCTTTTGTTGCCTTGATAGTATTTGACTTCAAAAGGACGGAGGATAAGCGGGTTGATTGCTTCCCATGTATTAAAAAACCTCAACCATCAGATAGTTCTGACAAATGTGTTAGTCAGGAGAAAGCTGGCCTTTTGACTAGATATATGAAGGACGTCCATGCACCCATTCTCAGCCATTGGGTAGTCAAAATATTGGTTATTGCTTTCTTCTTTGGCTTAGCAATGGCTGGAATTGCATTGTCCACCCGGATCGAGCCTGGTTTGGAGCAACAGATTGTTCTTCCTCAGGATTCGTATCTTCAGGGTTACTTCAACAATATATCGACATATCTTCGAATTGGTCCACCTCTATACTTTGTTGTGAAGAATTATAACTATAGCTCAGAATCAAGACAGACAAATCAACTGTGTTCCATTAACAAGTGTGATTCTAATTCTCTTTTGAATGAGATTGCAAAGGCTTCTTTGACTCCAGAAGTAAGCTACATAGCTAAGCCAGCTGCTTCATGGCTCGATGACTTTCTTGTGTGGTTATCTCCCGAGGCATTCGGATGTTGTCGAAAGTTTACGAATGGTACCTTCTGTCCCCCTGATGACCAGCCTCCTTGTTGCCCTTCTGATCAAGGAAGCTGTGGTCTAAGTGAAGTATGCAAAGATTGCACCACGTGCTTTCGGCATGCAGATTTAAGTAGTGACCGCCCATCAACAATACAATTCAAAGAGAAACTTCCTTGGTTCCTCAACGCACTTCCTTCAGCTGATTGTGCTAAAGGTGGCCATGGTGCTTATTCTACTAGTGTTGATTTGCAAGGCTATGAAAATGGTATTATTCAAGCTTCTTCATTCCGGACTTATCACACACCTCTTAACAAGCAGGCTGACTTTGTTAATTCAATGAGAGCAGCTCAAGAGTTTAGCTCAAAAGTTTCTCGTTCTTTAAAGATGGAGATATATCCATATTCAGTGTTTTATATGTTCTTTGAGCAATACCTTGACATATGGAAAACTGCGTTAATCAACCTCTCAATAGCCATTGCTGCAGTTTTTGCCGTGTGTTTAATCATTACATGCAGCTTTTGGAGCTCTGCAATTATTTTGCTGGTGATTGCAATGATCATTATTGATCTCCTGGGAGTAATGGCAGTCTTTCATATTCAGCTAAACGCACTATCGGTTGTAAACCTAATCATGTCGGTGGGAATAGCCGTTGAGTTTTGTGTACATATAACACACGCTTTCTCGATAAGCTCTGGGGACAGAAACCAACGGATGAAAGAGGCTCTCGGTGGAATGGGAGCTTCAGTTTTCAGTGGAATTACATTGACGAAGCTAGTTGGGGTGATTGTACTCGGCTTCTCAAGATCGGAAGTATTTGTGGTCTACTACTTCAAGATGTATTTGGCACTAGTCCTCCTCGGTTTCTTGCATGGCCTTGTATTCTTACCGGTGTTCTTGAGCATGTTTGGTCCAGCTCCAAGACATGTAGAAGGTGATAGGCAAGATCATCGACCTTCGGTTTCATCTCTGCCGTAG
Protein:  
MKIPSYLLLLLILFVLCRVEGRQSAGYCAMYDICGARSDGKVLNCPFNIPAVKPDDLLSSKIQSLCPTIAGDVCCTETQFDTLRSQVQQAIPFIVGCPACLRNFLNLFCELTCSPDQSLFINVTSTTKIKNNSTVDGIEYYITDSFGEGLYESCKNVKFGSSNSRALDFLGAGAKNFKEWFAFIGQKAGVNLPGSPYGIKFSPSPPVSSLMKPMNVSTYSCSDDTLGCSCGDCPSAAACSSTAAPPTQKRHACSIKIGSLEAKCVDFVLAILYTVLVSLFLGGGLFHRIKGKKNSSPLSEASRDRSSVNPQKADTIHAQMLQNTPQRNWAQLSAVQGFLANFYRKYGIWVARNPTLVLCLSVSAVLLLCVGLVQFKVETKPDKLWVGKGSRAAEEKQFFDTHLAPFYRIEQLIIASVPKSPHDKAPEILTDDNIKLLFDIQKKVDGLRANHSGSMVSLTDICLKPLGEDCATQSVLQYFKMKPGNYDDFGGVDHVKYCFEHFTSTESCLSAFKGPLDPTTALGGFSGNSYSEASAFIVTYPVDNAVDNEGNKTEKAVAWEKAFIQLAKDELLPMVKSKGLTLSFSSESSIEEELKRESTADVITIAISYLVMFAYISLALGDAPRLNSFYITSKVLLGLSGVLLVMLSVLGSAGLFSAVGMKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQEQDLLLERRISNALMEVGPSITLASLAEILAFAVGAYIKMPAVRVFSMFAALAVLLDFILQVTAFVALIVFDFKRTEDKRVDCFPCIKKPQPSDSSDKCVSQEKAGLLTRYMKDVHAPILSHWVVKILVIAFFFGLAMAGIALSTRIEPGLEQQIVLPQDSYLQGYFNNISTYLRIGPPLYFVVKNYNYSSESRQTNQLCSINKCDSNSLLNEIAKASLTPEVSYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCPSDQGSCGLSEVCKDCTTCFRHADLSSDRPSTIQFKEKLPWFLNALPSADCAKGGHGAYSTSVDLQGYENGIIQASSFRTYHTPLNKQADFVNSMRAAQEFSSKVSRSLKMEIYPYSVFYMFFEQYLDIWKTALINLSIAIAAVFAVCLIITCSFWSSAIILLVIAMIIIDLLGVMAVFHIQLNALSVVNLIMSVGIAVEFCVHITHAFSISSGDRNQRMKEALGGMGASVFSGITLTKLVGVIVLGFSRSEVFVVYYFKMYLALVLLGFLHGLVFLPVFLSMFGPAPRHVEGDRQDHRPSVSSLP